Good grief, has no one mention Avatar: Last of the Airbenders yet? Not to mention it's upcoming sequel is meant to have a female protagonist? :D
I think most of the DC animated series and movies are surprisingly free of all the issues the comics have. I hated Inpector Gadget, but god did I seriously think Penny was the best thing ever.
Anime, I still find so much of it "problematic" as someone put it. None of those women are me, or even close to being me. There was a real sense of disconnect with anime and its portrayals of "girls"
I still think one of the best recent Disney moves has to be Lilo and Stitch.